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Herben T. 2007: General patterns in plant invasions: a family of quasi-neutral models. In: Storch D., Marquet P.A. and Brown J.H. (eds.) Scaling biodiversity, Cambridge University Press, 376 - 395.
Herben T., Březina S., Skálová H., Hadincová V. & Krahulec F. 2007: Variation in plant performance in a grassland: species-specific and neighbouring root mass effects. Journal of Vegetation Science 18, 55 - 62.
Herben T., Härtel H., Trýzna M. & Marková I. 2007: Biota in sandstone habitats: sandstones as ecological islands. In: Härtel H., Cílek V., Herben T., Jackson A. & Williams R. (eds.), Sandstone Landscapes. Academia, Praha., 141 - 143.
Rothanzl J., Kotoučová M., Hrabinová I., Plačková I. & Herben T. 2007: Genetic differentiation of Agrostis capillaris in a grassland system with stable heterogeneity due to terricolous ants. Journal of Ecology 95, 197 - 207.
Sádlo J. & Heben T. 2007: Disturbance, denudation/accumulation dynamics and vegetation patterns in sandstone regions. In: Härtel H., Cílek V., Herben T., Jackson A. & Williams R. (eds.), Sandstone Landscapes. Academia, Praha., 205 - 212.
Wildová R., Gough L., Herben T., Hershock Ch. & Goldberg E.D. 2007: Architectural and growth traits differ in effects on performance of clonal plants: an analysis using a field-parameterized simulation model. Oikos 116, 836 - 852.
Wildová R., Wild J. & Herben T. 2007: Fine-scale dynamics of rhizomes in a grassland community. Ecography 30, 264 - 276.
Herben T. Münzbergová Z., Mildén M., Ehrlén J., Cousins S.A.O. & Eriksson O. 2006: Long-term spatial dynamics of Succisa pratensis in a changing rural landscape: linking dynamical modelling with historical maps. Journal of Ecology 94, 131 - 143.
Kyncl T., Suda J., Wild J., Wildová R. & Herben T. 2006: Population dynamics and clonal growth of Spartocytisus supranubius (Fabaceae), a dominant shrub in the alpine zone of Tenerife, Canary Islands. Plant Ecology 186, 97 - 108.
Mildén M., Münzbergová Z., Herben T. & Ehrlén J. 2006: Metapopulation dynamics of a perennial plant, Succisa pratensis, in an agricultural landscape. Ecological Modelling 199, 464 - 475.
Suzuki J., Herben T., Krahulec F., Štorchová H. & Hara T. 2006: Effects of neighbourhood structure and tussock dynamics on genet demography of Festuca rubra in a mountain meadow. Journal of Ecology 94, 66 - 76.
Dostál P., Březnová M., Kozlíčková V., Herben T. & Kovář P. 2005: Ant-induced soil modification and its effect on plant below-ground biomass. Pedobiologia 49, 127 - 137.
Herben T. 2005: Species pool size and invasibility of island communities: a null model of sampling effects. Ecology Letters 8, 909 - 917.
Herben T., Suda J. & Munclinger P. 2005: The ghost of hybridization past: niche pre-emption is not the only explanation of apparent monophyly in island endemics. Journal of Ecology 93, 572 - 575.
Münzbergová Z. & Herben T. 2005: Seed, dispersal, microsite, habitat and recruitment limitation - identification of terms and concepts in studies of limitations. Oecologia 145, 1 - 8.
Münzbergová Z., Křivánek M., Bucharová A., Juklíčková V. & Herben T. 2005: Ramet performance in two tussock plants – Do the tussock-level parameters matter? Flora 200, 275 - 284.
Münzbergová Z., Mildén M., Ehrlén J. & Herben T. 2005: Population viability and reintroduction strategies: a spatially explicit landscape-level approach. Ecological Applications 15, 1377 - 1386.
Herben T. 2004: Physiological integration affects growth form and competitive ability in clonal plants. Evolutionary Ecology 18, 493 - 520.
Herben T., Mandák B., Bímová K. & Münzbergová Z. 2004: Invasibility and species richness of a community: a neutral model and a survey of published data. Ecology 85, 3223 - 3233.
Münzbergová Z. & Herben. T. 2004: Identification of suitable unoccupied habitats in metapopulation studies using co-occurrence of species. Oikos 105, 408 - 414.