Bohutínská M., Petříková E., Booker T. R., Vives Cobo C., Vlček J., Šrámková G., Poupětová A., Hojka J., Marhold K., Yant L., Kolář F. & Schmickl R. 2024: Polyploids broadly generate novel haplotypes from trans-specific variation in Arabidopsis arenosa and Arabidopsis lyrata. PLoS Genetics 20, 1 - 21. doi:10.1371/journal.pgen.1011521 |
Bray S. M., Hämälä T., Zhou M., Busoms S., Fischer S., Desjardins S. D., Mandáková T., Moore C., Mathers T. C., Cowan L., Monnahan P., Koch J., Wolf E. M., Lysák M. A., Kolář F., Higgins J. D., Koch M. A. & Yant L. 2024: Kinetochore and ionomic adaptation to whole-genome duplication in Cochlearia shows evolutionary convergence in three autopolyploids. Cell Reports 43, 1 - 29. doi:10.1016/j.celrep.2024.114576 |
Hämälä T., Moore C., Cowan L., Carlile M., Gopaulchan D., Brandrud M. K., Birkeland S., Loose M., Kolář F., Koch M. A. & Yant L. 2024: Impact of whole-genome duplications on structural variant evolution in Cochlearia. Nature Communications 15, 1 - 13. https://doi.org/10.1038/s41467-024-49679-y |
Kandziora M., Gorospe J. M., Salomon L., Vásquez D. L. A., Vargas M. P., Kolář F., Sklenář P. & Schmickl R. 2024: The ghost of past climate acting on present-day plant diversity: Lessons from a climate-based delimitation of the tropical alpine ecosystem. Journal of Systematics and Evolution 62, 275 - 290. https://doi.org/10.1111/jse.13048 |
Salony S., Clo J., Vallejo-Marin M. & Kolář F. 2024: Establishment of polyploidy in natural populations of Mimulus guttatus. Plant Systematics and Evolution 310, 1 - 14. https://doi.org/10.1007/s00606-024-01914-1 |
Blanco-Gavaldà C., Galbany-Casals M., Susanna A., Andrés-Sánchez S., Bayer R. J., Brochmann C., Cron G. V., Bergh N. G., Garcia-Jacas N., Gizaw A., Kandziora M., Kolář F., López-Alvarado J., Leliaert F., Letsara R., Moreyra L. D., Razafimandimbison S. G., Schmickl R. & Roquet C. 2023: Repeatedly northwards and upwards: Southern African grasslands fuel the colonization of the African sky islands in Helichrysum (Compositae). Plants-Basel 12, 1 - 24. doi:10.3390/plants12112213 |
Bohutínská M., Vlček J., Monnahan P. & Kolář F. 2023: Population Genomic Analysis of Diploid-Autopolyploid Species. – In: Van de Peer Y. (ed.) Polyploidy. Methods and Protokols, Springer, New York, 297 - 324. https://link.springer.com/protocol/10.1007/978-1-0716-2561-3_16 |
Lipánová V., Nunvářová Kabátová K., Zeisek V., Kolář F. & Chrtek J. 2023: Evolution of the Sabulina verna group (Caryophyllaceae) in Europe: A deep split, followed by secondary contacts, multiple allopolyploidization and colonization of challenging substrates. Molecular Phylogenetics and Evolution 189, 1 - 16. doi:10.1016/j.ympev.2023.107940 |
Loureiro J., Čertner M., Lučanová M., Sliwinska E., Kolář F., Doležel J., Garcia S., Castro S. & Galbraith D. W. 2023: The Use of Flow Cytometry for Estimating Genome Sizes and DNA Ploidy Levels in Plants. In: Heitkam T. & Garcia S. (eds.) Plant Cytogenetics and Cytogenomics. Methods in Molecular Biology, vol 2672. Humana, New York, USA. 2672, 25 - 64. https://doi.org/10.1007/978-1-0716-3226-0_2 |
Padilla‐García N., Šrámková G., Záveská E., Šlenker M., Clo J., Zeisek V., Lučanová M., Rurane I., Kolář F. & Marhold K. 2023: The importance of considering the evolutionary history of polyploids when assessing climatic niche evolution. Journal of Biogeography 50, 86 - 100. https://doi.org/10.1111/jbi.14496 |
Clo J. & Kolář F. 2022: Inbreeding depression in polyploid species: a meta-analysis. Biology Letters 18, 1 - 6. https://doi.org/10.1098/rsbl.2022.0477 |
Clo J., Padilla-García N. & Kolář F. 2022: Polyploidization as an opportunistic mutation: the role of unreduced gametes formation and genetic drift in polyploid establishment. Journal of Evolutionary Biology 35, 1099 - 1109. doi:10.1111/jeb.14055 |
Čertner M., Lučanová M., Sliwinska E., Kolář F. & Loureiro J. 2022: Plant material selection, collection, preservation, and storage for nuclear DNA content estimation. Cytometry Part A 101, 737 - 748. https://doi.org/10.1002/cyto.a.24482 |
Gizaw A., Gorospe J. M., Kandziora M., Chala D., Gustafsson L., Zinaw A., Salomón L., Eilu G., Brochmann C., Kolář F. & Schmickl R. 2022: Afro-alpine flagships revisited II: elucidating the evolutionary relationships and species boundaries in the giant senecios (Dendrosenecio, Asteraceae). Alpine Botany 132, 89 - 105. doi:10.1007/s00035-021-00268-5 |
Kandziora M., Sklenář P., Kolář F. & Schmickl R. 2022: How to tackle phylogenetic discordance in recent and rapidly radiating groups? Developing a workflow using Loricaria (Asteraceae) as an example. Frontiers in Plant Science 12, 1 - 16. doi:10.3389/fpls.2021.765719 |
Konečná V., Šustr M., Požárová D., Čertner M., Krejčová A., Tylová E. & Kolář F. 2022: Genomic basis and phenotypic manifestation of (non-)parallel serpentine adaptation in Arabidopsis arenosa. Evolution 76, 2315 - 2331. doi:doi.org/10.1111/evo.14593 |
Salomón L., Nicola M., Kandziora M., Kolář F. & Sklenář P. 2022: Center of origin and evolutionary history in the high Andean genus Oritrophium (Astereae, Asteraceae). Alpine Botany 132, 123 - 139. doi:10.1007/s00035-021-00271-w |
Wos G., Arc E., Huelber K., Konečná V., Knotek A., Požárová D., Bertel C., Kaplenig D., Mandáková T., Neuner G., Schönswetter P., Kranner I. & Kolář F. 2022: Parallel local adaptation to an alpine environment in Arabidopsis arenosa. Journal of Ecology 110, 2448 - 2461. doi:doi.org/10.1111/1365-2745.13961 |
Wos G., Macková L., Kubíková K. & Kolář F. 2022: Ploidy and local environment drive intraspecific variation in endoreduplication in Arabidopsis arenosa. American Journal of Botany 109, 259 - 271. doi:10.1002/ajb2.1818 |
Bohutínská M., Alston M., Monnahan P., Mandáková T., Bray S., Paajanen P., Kolář F. & Yant L. 2021: Novelty and Convergence in Adaptation to Whole Genome Duplication. Molecular Biology and Evolution 38, 3910 - 3924. doi:10.1093/molbev/msab096 |