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Bayerová Š., Halda J, Liška J. & Uhlík P. 2004: Příspěvek k poznání lichenoflóry Krušných hor (Česká republika). Bryonora 33, 28 - 35.
Bayerová Š. & Kukwa M. 2004: New records of leprarioid lichens in the Czech Republic. Biologia 59/1, 19 - 23.
Bielczyk U., Lackovičová A., Farkas E.E., Lökos L., Liška J., Breuss O. & Kondratyuk S.Ya. 2004: Checklist of lichens of the Western Carpathians. W.Szafer Institute of Botany, Polish Academy of Sciences, 1 - 181.
Bímová K., Mandák B. & Kašparová I. 2004: How does Reynoutria invasion fit the various theories of invasibility. Journal of Vegetation Science 15, 495 - 504.
Drábková L., Kirchner J., Vlček C. & Pačes V. 2004: TrnL-trnF intergenic spacer and trnL intron define clades within Luzula and Juncus (Juncaceae). Journal of Molecular Evolution 59 (1), 1 - 10.
Drábková L. & Kirschner J. 2004: Juncus uruguensis Griseb. - a member of section Juncotypus (Juncaceae, subg. Agathryon). Nordic Journal of Botany 22 (6), 687 - 691.
Chrtek J. jun. 2004: Jestřábníky podrodu Hieracium v Krkonoších. Štursa J., Mazurski K.R., Palucki A. & Potocka J. (eds.): Geoekologické problémy Krkonoš, Opera Corcontica 41, 142 - 147.
Chrtek J. jun., Mráz P. & Severa M. 2004: Chromosome numbers in selected species of Hieracium s.str. (Hieracium subgen. Hieracium. Preslia 76, 119 - 139.
Jarolímová V. 2004: Influence of toxic substrates of the abandoned sedimentation basins on chromosome apparatus of vascular plants. In: Kovář P. (ed) Natural Recovery of Human-Made Deposits in Lanscape (Biotic Interactions and Ore/Ash-Slag Artificial Ecosystems). Academia, Praha, 77 - 82.
J. Kirschner, L. Rejdali M. & Drábková L. 2004: A new Juncus of the sect. Tenageia from Marocco. Preslia 76 (4), 371 - 376.
Kaplan Z. & Fehrer J. 2004: Evidence for the hybrid origin of Potamogeton ×cooperi (Potamogetonaceae): traditional morphology-based taxonomy and molecular techniques in concert. Folia Geobotanica 39, 431 - 453.
Kaplan Z. & Symoens J.-J. 2004: Proposal to conserve the name Potamogeton schweinfurthii A. Benn. (Potamogetonaceae) with a conserved type. Taxon 53, 837 - 838.
Kaplan Z. & Wolff P. 2004: A morphological, anatomical and isozyme study of Potamogeton ×schreberi: confirmation of its recent occurrence in Germany and first documented record in France. Preslia 76, 141 - 161.
Kaplan Z. & Zalewska-Gałosz J. 2004: Potamogeton taxa proposed by J. F. Wolfgang and his collaborators. Taxon 53, 1033 - 1041.
Kirschner J., Bartish I., Hroudová Z., Kirschnerová L. & Zákravský P 2004: Contrasting patterns of spatial genetic structure of diploid and triploid populations of the clonal aquatic species, Butomus umbellatus (Butomaceae), in Central Europel. Folia Geobotanica 39 (1), 13 - 26.
Kirschner J. &Štěpánek J. 2004: New sections in Taraxacum. Folia Geobotanica 39, 259 - 274.
Kovář P., Štěpánek J. & Kirschner J. 2004: Clonal diversity of Calamagrostis epigejos (L.) Roth in relation to type of industrial substrate and successional stage. In: Kovář P. (ed.) Natural recovery in human-made deposits in landscape, Academia, Praha, 285 - 293.
Liška J. 2004: Česká a slovenská lichenologická bibliografie XVII. Bryonora 34, 38 - 41.
Liška J. & Soldán Z. 2004: Alien vascular plants recorded from the Barentsburg and Pyramiden settlements, Svalbard. 76, 279 - 290.
Lumbsch H. T., Schmitt I., Palice Z., Wiklund E., Ekman S. & Wedin M. 2004: Supraordinal phylogenetic relationships of Lecanoromycetes based on a Bayesian analysis of combined nuclear and mitochondrial sequences. Molecular Phylogenetics and Evolution 31, 822 - 832.